Mass Spectrometry Search Tool¶
We have a new implementation of the MASST tool in GNPS2 that is significantly accelerated.
Below are the databases and their descriptions:
| Index Name | Description | Status |
|---|---|---|
| metabolomicspanrepo_index_latest | Latest metabolomics data | Current |
| gnpslibrary_index | Latest GNPS library metabolomics data | Current |
| gnpsdata_index | Original GNPS data indexing for metabolomics data | 2022 |
| gnpsdata_index_11_25_23 | Rebuilding of index for GNPS metabolomics data for plantmasst | Nov 25 2023 |
| massivekb_index | Proteomics library massivekb index | 2022 |
| massivedata_index | Proteomics raw data index | 2022 |
Interacting Programmatically¶
Checkout the API in the GNPSDatapackage for API access here.
Commandline Access¶
Checkout the commandline tool here.
GNPS2 Workflow¶
Checkout the GNPS2 Workflow here.