modifinder.classes.EdgeDetail.EdgeDetail

class modifinder.classes.EdgeDetail.EdgeDetail(number_of_modifications: int = -1, match_score: float = 0, matches: List[Match] | None = None, start_spectrum_id: str | None = None, end_spectrum_id: str | None = None)

Class for Edge Details

Parameters:

• number_of_modifications (int) – Number of modifications, -1 for unknown

• match_score (float) – Match score, how well the two spectra match

• matches (List[Match]) – List of matches, each match is a tuple of two peak indices and the match type. It is important to note that match has directionality. The first peak index is from the first node of the edge and the second peak index is from the second node of the edge.

__init__(number_of_modifications: int = -1, match_score: float = 0, matches: List[Match] | None = None, start_spectrum_id: str | None = None, end_spectrum_id: str | None = None)

Initialize the EdgeDetail object.

Parameters:

• number_of_modifications (int) – Number of modifications, -1 for unknown

• match_score (float) – Match score, how well the two spectra match

• matches (List[Match]) – List of matches, each match is a tuple of two peak indices and the match type. It is important to note that match has directionality. The first peak index is from the first node of the edge and the second peak index is from the second node of the edge.

Methods

__init__([number_of_modifications, ...])	Initialize the EdgeDetail object.
copy()	Create a copy of the EdgeDetail object
get_matches_pairs()	Get the matches as a list of tuples
get_meta_data()	Get the metadata of the EdgeDetail
get_single_type_matches(match_type)	Get the matches of a specific type
reverse_match()	Reverse the matches order in the EdgeDetail object